BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004A03LP1|AL425209
(941 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig745 1309 0.0
>3x_Contig745
Length = 2073
Score = 1309 bits (656), Expect = 0.0
Identities = 744/765 (97%), Gaps = 11/765 (1%)
Strand = Plus / Plus
Query: 181 agtctactgaattcacagacaagttgctgaaaaatttttctagcacaaaggagatggatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 agtctactgaattcacagacaagttgctgaaaaatttttctagcacaaaggagatggatg 63
Query: 241 ataatattacatgttgtcctagtttcagtaagttgttgttttcttgtgtattcaaattcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 ataatattacatgttgtcctagtttcagtaagttgttgttttcttgtgtattcaaattcg 123
Query: 301 aagaaagatctatcaacgtcttcgaattttgaatgaaatgcatcaatttttctttcaaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 aagaaagatctatcaacgtcttcgaattttgaatgaaatgcatcaatttttctttcaaaa 183
Query: 361 ag-aatggaattgtatcctgttgctgctgctgcggttgttgttgcggatgttgttgatca 419
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 aggaatggaattgtatcctgttgctgctgctgcggttgttgttgcggatgttgttgatca 243
Query: 420 gtttgatcatttcccgcgttattgctcttattctttgtcaaagctaaattcaaaagagag 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gtttgatcatttcccgcgttattgctcttattctttgtcaaagctaaattcaaaagagag 303
Query: 480 aaatcatgggtagatagagccaagtcagcaaggtttgcttgacttttttgttcattttct 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 aaatcatgggtagatagagccaagtcagcaaggtttgcttgacttttttgttcattttct 363
Query: 540 tgttgaacatttattggattcgtagtcaagtctttgataacatccctcatgnattcgtca 599
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 364 tgttgaacatttattggattcgtagtcaagtctttgataacatccctcatgaattcgtca 423
Query: 600 tagctttgcttgavagtgtttgagttattcagctgttgatgtagggaagtagatgacttg 659
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tagctttgcttgaaagtgtttgagttattcagctgttgatgtagggaagtagatgacttg 483
Query: 660 tacaccatgcgaataggttttggctgaattattggagccggactgtttatrktattggta 719
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 484 tacaccatgcgaataggttttggctgaattattggagccggactgtttatgttattggta 543
Query: 720 gaagaagtggatg-atgtatgggtagtg-actg-cactcagaagtgg-atttgaggtgta 775
||||||||||||| |||||||||||||| |||| ||||||||||||| ||||||||||||
Sbjct: 544 gaagaagtggatgaatgtatgggtagtgaactgccactcagaagtggcatttgaggtgta 603
Query: 776 tgg-tttgagaggg-tgt-atgtggcatgtggagcgacttgggatgcsgsc-maraagat 831
||| |||||||||| ||| |||||||||||||||||||||||||||| | | | |||||
Sbjct: 604 tggttttgagagggttgtaatgtggcatgtggagcgacttgggatgccggcacagaagat 663
Query: 832 ggatttgaagcagcgtgagttgtcgatgatgatg-cmaacttgaagcccctgaatgatgc 890
|||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 664 ggatttgaagcagcgtgagttgtcgatgatgatgccaaacttgaagcccctgaatgatgc 723
Query: 891 gaatgtactggagaagttg-tcttgaaataagccagtcytcatcc 934
||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 724 gaatgtactggagaagttgttcttgaaataagccagtcctcatcc 768
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8548
Number of Sequences: 1807
Number of extensions: 8548
Number of successful extensions: 129
Number of sequences better than 1.0e-20: 1
length of query: 941
length of database: 10,358,551
effective HSP length: 16
effective length of query: 925
effective length of database: 10,329,639
effective search space: 9554916075
effective search space used: 9554916075
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)